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Volume 10 - No: 3

High-Throughput Genomic Approaches for Predicting Climate Change Impacts on Marine and Freshwater Biodiversity

  • Aiman Mailybayeva Candidate of Physical and Mathematical Sciences, Associate Professor, Department of Informatics, Atyrau University named after Kh. Dosmukhamedov, Atyrau, Kazakhstan.
    mjmafka@mail.ru
    https://orcid.org/0000-0003-0598-4806
  • Dr. T.R. Vijaya Lakshmi Associate Professor, ECE, Mahatma Gandhi Institute of Technology, Hyderabad, India.
    trvijayalakshmi_ece@mgit.ac.in
    https://orcid.org/0000-0002-1197-2935
  • S. Hemanth Kumar Professor, Faculty of Management Studies, CMS Business School, JAIN (Deemed -to-be University), Bengaluru, Karnataka, India.
    dr.hemanthkumar@cms.ac.in
    https://orcid.org/0009-0006-4768-9900
  • Dr. Bechoo Lal Associate Professor, Department of Computer Science and Engineering, Konenru Lakshmaiah Education Foundation, Vaddeswaram, AP, India.
    drblalpersonal@gmail.com
    https://orcid.org/0000-0002-0225-1001
  • Dr. Rashmi Mahajan Professor, Department of Marketing, Balaji Institute of International Business, Sri Balaji University Pune, Maharashtra, India.
    rashmidmahajan@gmail.com
    https://orcid.org/0000-0001-9082-6874
  • Komal Parashar Centre of Research Impact and Outcome, Chitkara University, Rajpura, Punjab, India.
    komal.parashar.orp@chitkara.edu.in
    https://orcid.org/0009-0007-8120-2083
DOI: 10.28978/nesciences.1811163
Keywords: Environmental DNA (eDNA), high-throughput sequencing (HTS), genomic vulnerability, ecological forecasting, transcriptomics, climate adaptation, aquatic biodiversity.

Abstract

Climate change is transforming the marine and freshwater ecosystems at a rate that is not within the capabilities of traditional biodiversity observing. Normal moral surveys are often characterized by poor detection rates of rare species and cannot detect physiological stress until death occurs. The paper will assess the predictive potential of the High-Throughput sequencing (HTS) methodologies, namely environmental DNA (eDNA) metabarcoding, population genomics (RAD-seq), and transcriptomics, as key engineering instruments in ecological forecasting. It is proven that the use of genomic data is important to statistically improve the resolution of biodiversity measurements. According to recent meta-analyses, eDNA metabarcoding is better at increasing the sensitivity of species detection over traditional netting and visual surveys. Moreover, the determination of single-nucleotide polymorphisms (SNPs) can be used to produce the so-called Genomic Vulnerability Indices, which are an effective measure of the incompatibility between present genotypes and future climatic projections. Comparative analysis points to the idea that marine systems are more connected and permit gene flow, which counters localized extinction, whilst freshwater populations have statistically different fragmentation signatures, which increase risks to climate. It is found that range shift predictions in Species Distribution Models (gSDMs) are less uncertain with the inclusion of genomic variables. With the swap in descriptive observation to high-throughput data engineering, conservation strategies will shift their approach to crisis management to proactive evidence-based resilience planning.

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Date

December 2025

Page Number

833-843